Difference between revisions of "Example Fundamental Matrix"

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The Fundamental matrix is a 3 by 3 matrix which describes the geometric (epipolar) relationship between two images.  In the example below, features are automatically found and the fundamental matrix computed using two different techniques.  The robust technique uses RANSAC to remove incorrect image pairs (see image above) followed by non-linear optimization.  The simple technique assumes that all the image pairs are correct (not true in this scenario) and apply a fast to compute linear algorithm.
The Fundamental matrix is a 3 by 3 matrix which describes the geometric (epipolar) relationship between two images.  In the example below, features are automatically found and the fundamental matrix computed using two different techniques.  The robust technique uses RANSAC to remove incorrect image pairs (see image above) followed by non-linear optimization.  The simple technique assumes that all the image pairs are correct (not true in this scenario) and apply a fast to compute linear algorithm.


Example File: [https://github.com/lessthanoptimal/BoofCV/blob/v0.23/examples/src/boofcv/examples/stereo/ExampleFundamentalMatrix.java ExampleFundamentalMatrix.java]
Example File: [https://github.com/lessthanoptimal/BoofCV/blob/v0.40/examples/src/main/java/boofcv/examples/sfm/ExampleComputeFundamentalMatrix.java ExampleComputeFundamentalMatrix.java]


Concepts:
Concepts:
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* Fundamental matrix
* Fundamental matrix
* Stereo Vision
* Stereo Vision
Relevant Applets:
* [[Applet_Calibrate_Planar_Mono| Monocular Camera Calibration]]


Related Examples:
Related Examples:
* [[Example_Remove_Lens_Distortion| Removing Lens Distortion]]
* [[Example_Remove_Lens_Distortion| Removing Lens Distortion]]
* [[Example_Rectification_Uncalibrated| Rectify Uncalibrated Stereo Pair]]


= Example Code =
= Example Code =
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<syntaxhighlight lang="java">
<syntaxhighlight lang="java">
/**
/**
  * A Fundamental matrix describes the epipolar relationship between two images. If two points, one from
  * A Fundamental matrix describes the epipolar relationship between two images. If two points, one from
  * each image, match, then the inner product around the Fundamental matrix will be zero. If a fundamental
  * each image, match, then the inner product around the Fundamental matrix will be zero. If a fundamental
  * matrix is known, then information about the scene and its structure can be extracted.
  * matrix is known, then information about the scene and its structure can be extracted.
  *
  *
  * Below are two examples of how a Fundamental matrix can be computed using different.
  * Below are two examples of how a Fundamental matrix can be computed using different.
  * The robust technique attempts to find the best fit Fundamental matrix to the data while removing noisy
  * The robust technique attempts to find the best fit Fundamental matrix to the data while removing noisy
  * matches, The simple version just assumes that all the matches are correct. Similar techniques can be used
  * matches, The simple version just assumes that all the matches are correct. Similar techniques can be used
  * to fit various other types of motion or structural models to observations.
  * to fit various other types of motion or structural models to observations.
  *
  *
  * The input image and associated features are displayed in a window. In another window, inlier features
  * The input image and associated features are displayed in a window. In another window, inlier features
  * from robust model fitting are shown.
  * from robust model fitting are shown.
  *
  *
  * @author Peter Abeles
  * @author Peter Abeles
  */
  */
public class ExampleFundamentalMatrix {
public class ExampleComputeFundamentalMatrix {
 
/**
/**
* Given a set of noisy observations, compute the Fundamental matrix while removing
* Given a set of noisy observations, compute the Fundamental matrix while removing the noise.
* the noise.
*
*
* @param matches List of associated features between the two images
* @param matches List of associated features between the two images
Line 50: Line 44:
* @return The found fundamental matrix.
* @return The found fundamental matrix.
*/
*/
public static DenseMatrix64F robustFundamental( List<AssociatedPair> matches ,
public static DMatrixRMaj robustFundamental( List<AssociatedPair> matches,
List<AssociatedPair> inliers ) {
List<AssociatedPair> inliers, double inlierThreshold ) {
var configRansac = new ConfigRansac();
configRansac.inlierThreshold = inlierThreshold;
configRansac.iterations = 1000;
ConfigFundamental configFundamental = new ConfigFundamental();
configFundamental.which = EnumFundamental.LINEAR_7;
configFundamental.numResolve = 2;
configFundamental.errorModel = ConfigFundamental.ErrorModel.GEOMETRIC;
// geometric error is the most accurate error metric, but also the slowest to compute. See how the
// results change if you switch to sampson and how much faster it is. You also should adjust
// the inlier threshold.


// used to create and copy new instances of the fit model
ModelMatcher<DMatrixRMaj, AssociatedPair> ransac =
ModelManager<DenseMatrix64F> managerF = new ModelManagerEpipolarMatrix();
FactoryMultiViewRobust.fundamentalRansac(configFundamental, configRansac);
// Select which linear algorithm is to be used.  Try playing with the number of remove ambiguity points
Estimate1ofEpipolar estimateF = FactoryMultiView.computeFundamental_1(EnumEpipolar.FUNDAMENTAL_7_LINEAR, 2);
// Wrapper so that this estimator can be used by the robust estimator
GenerateEpipolarMatrix generateF = new GenerateEpipolarMatrix(estimateF);
 
// How the error is measured
DistanceFromModelResidual<DenseMatrix64F,AssociatedPair> errorMetric =
new DistanceFromModelResidual<DenseMatrix64F,AssociatedPair>(new FundamentalResidualSampson());
 
// Use RANSAC to estimate the Fundamental matrix
ModelMatcher<DenseMatrix64F,AssociatedPair> robustF =
new Ransac<DenseMatrix64F, AssociatedPair>(123123,managerF,generateF,errorMetric,6000,0.1);


// Estimate the fundamental matrix while removing outliers
// Estimate the fundamental matrix while removing outliers
if( !robustF.process(matches) )
if (!ransac.process(matches))
throw new IllegalArgumentException("Failed");
throw new IllegalArgumentException("Failed");


// save the set of features that were used to compute the fundamental matrix
// save the set of features that were used to compute the fundamental matrix
inliers.addAll(robustF.getMatchSet());
inliers.addAll(ransac.getMatchSet());


// Improve the estimate of the fundamental matrix using non-linear optimization
// Improve the estimate of the fundamental matrix using non-linear optimization
DenseMatrix64F F = new DenseMatrix64F(3,3);
var F = new DMatrixRMaj(3, 3);
ModelFitter<DenseMatrix64F,AssociatedPair> refine =
ModelFitter<DMatrixRMaj, AssociatedPair> refine =
FactoryMultiView.refineFundamental(1e-8, 400, EpipolarError.SAMPSON);
FactoryMultiView.fundamentalRefine(1e-8, 400, EpipolarError.SAMPSON);
if( !refine.fitModel(inliers, robustF.getModelParameters(), F) )
if (!refine.fitModel(inliers, ransac.getModelParameters(), F))
throw new IllegalArgumentException("Failed");
throw new IllegalArgumentException("Failed");


Line 88: Line 80:
/**
/**
* If the set of associated features are known to be correct, then the fundamental matrix can
* If the set of associated features are known to be correct, then the fundamental matrix can
* be computed directly with a lot less code. The down side is that this technique is very
* be computed directly with a lot less code. The down side is that this technique is very
* sensitive to noise.
* sensitive to noise.
*/
*/
public static DenseMatrix64F simpleFundamental( List<AssociatedPair> matches ) {
public static DMatrixRMaj simpleFundamental( List<AssociatedPair> matches ) {
// Use the 8-point algorithm since it will work with an arbitrary number of points
// Use the 8-point algorithm since it will work with an arbitrary number of points
Estimate1ofEpipolar estimateF = FactoryMultiView.computeFundamental_1(EnumEpipolar.FUNDAMENTAL_8_LINEAR, 0);
Estimate1ofEpipolar estimateF = FactoryMultiView.fundamental_1(EnumFundamental.LINEAR_8, 0);


DenseMatrix64F F = new DenseMatrix64F(3,3);
var F = new DMatrixRMaj(3, 3);
if( !estimateF.process(matches,F) )
if (!estimateF.process(matches, F))
throw new IllegalArgumentException("Failed");
throw new IllegalArgumentException("Failed");


Line 108: Line 100:
* fundamental matrix.
* fundamental matrix.
*/
*/
public static List<AssociatedPair> computeMatches( BufferedImage left , BufferedImage right ) {
public static List<AssociatedPair> computeMatches( BufferedImage left, BufferedImage right ) {
DetectDescribePoint detDesc = FactoryDetectDescribe.surfStable(
DetectDescribePoint<GrayF32, TupleDesc_F64> detDesc = FactoryDetectDescribe.surfStable(
new ConfigFastHessian(1, 2, 200, 1, 9, 4, 4), null,null, GrayF32.class);
new ConfigFastHessian(0, 2, 400, 1, 9, 4, 4), null, null, GrayF32.class);
// DetectDescribePoint detDesc = FactoryDetectDescribe.sift(null,new ConfigSiftDetector(2,0,200,5),null,null);
// DetectDescribePoint detDesc = FactoryDetectDescribe.sift(null,new ConfigSiftDetector(2,0,200,5),null,null);


ScoreAssociation<BrightFeature> scorer = FactoryAssociation.scoreEuclidean(BrightFeature.class,true);
ScoreAssociation<TupleDesc_F64> scorer = FactoryAssociation.scoreEuclidean(TupleDesc_F64.class, true);
AssociateDescription<BrightFeature> associate = FactoryAssociation.greedy(scorer, 1, true);
AssociateDescription<TupleDesc_F64> associate = FactoryAssociation.greedy(new ConfigAssociateGreedy(true, 0.1), scorer);


ExampleAssociatePoints<GrayF32,BrightFeature> findMatches =
var findMatches = new ExampleAssociatePoints<>(detDesc, associate, GrayF32.class);
new ExampleAssociatePoints<GrayF32,BrightFeature> (detDesc, associate, GrayF32.class);


findMatches.associate(left,right);
findMatches.associate(left, right);


List<AssociatedPair> matches = new ArrayList<AssociatedPair>();
List<AssociatedPair> matches = new ArrayList<>();
FastQueue<AssociatedIndex> matchIndexes = associate.getMatches();
FastAccess<AssociatedIndex> matchIndexes = associate.getMatches();


for( int i = 0; i < matchIndexes.size; i++ ) {
for (int i = 0; i < matchIndexes.size; i++) {
AssociatedIndex a = matchIndexes.get(i);
AssociatedIndex a = matchIndexes.get(i);
AssociatedPair p = new AssociatedPair(findMatches.pointsA.get(a.src) , findMatches.pointsB.get(a.dst));
var p = new AssociatedPair(findMatches.pointsA.get(a.src), findMatches.pointsB.get(a.dst));
matches.add( p);
matches.add(p);
}
}


Line 133: Line 124:
}
}


public static void main( String args[] ) {
public static void main( String[] args ) {
 
String dir = UtilIO.pathExample("structure/");
String dir = UtilIO.pathExample("structure/");


BufferedImage imageA = UtilImageIO.loadImage(dir , "undist_cyto_01.jpg");
BufferedImage imageA = UtilImageIO.loadImage(dir, "undist_cyto_01.jpg");
BufferedImage imageB = UtilImageIO.loadImage(dir , "undist_cyto_02.jpg");
BufferedImage imageB = UtilImageIO.loadImage(dir, "undist_cyto_02.jpg");


List<AssociatedPair> matches = computeMatches(imageA,imageB);
List<AssociatedPair> matches = computeMatches(imageA, imageB);


// Where the fundamental matrix is stored
// Where the fundamental matrix is stored
DenseMatrix64F F;
DMatrixRMaj F;
// List of matches that matched the model
// List of matches that matched the model
List<AssociatedPair> inliers = new ArrayList<AssociatedPair>();
List<AssociatedPair> inliers = new ArrayList<>();


// estimate and print the results using a robust and simple estimator
// estimate and print the results using a robust and simple estimator
// The results should be difference since there are many false associations in the simple model
// The results should be difference since there are many false associations in the simple model
// Also note that the fundamental matrix is only defined up to a scale factor.
// Also note that the fundamental matrix is only defined up to a scale factor.
F = robustFundamental(matches, inliers);
F = robustFundamental(matches, inliers, 0.5);
System.out.println("Robust");
System.out.println("Robust");
CommonOps_DDRM.divide(F, NormOps_DDRM.normF(F)); // scale to make comparision easier
F.print();
F.print();


F = simpleFundamental(matches);
F = simpleFundamental(matches);
System.out.println("Simple");
System.out.println("Simple");
CommonOps_DDRM.divide(F, NormOps_DDRM.normF(F));
F.print();
F.print();


// display the inlier matches found using the robust estimator
// display the inlier matches found using the robust estimator
AssociationPanel panel = new AssociationPanel(20);
var panel = new AssociationPanel(20);
panel.setAssociation(inliers);
panel.setAssociation(inliers);
panel.setImages(imageA,imageB);
panel.setImages(imageA, imageB);


ShowImages.showWindow(panel, "Inlier Pairs");
ShowImages.showWindow(panel, "Inlier Pairs");

Latest revision as of 16:31, 17 January 2022

The Fundamental matrix is a 3 by 3 matrix which describes the geometric (epipolar) relationship between two images. In the example below, features are automatically found and the fundamental matrix computed using two different techniques. The robust technique uses RANSAC to remove incorrect image pairs (see image above) followed by non-linear optimization. The simple technique assumes that all the image pairs are correct (not true in this scenario) and apply a fast to compute linear algorithm.

Example File: ExampleComputeFundamentalMatrix.java

Concepts:

  • Epipolar constraint
  • Fundamental matrix
  • Stereo Vision

Related Examples:

Example Code

/**
 * A Fundamental matrix describes the epipolar relationship between two images. If two points, one from
 * each image, match, then the inner product around the Fundamental matrix will be zero. If a fundamental
 * matrix is known, then information about the scene and its structure can be extracted.
 *
 * Below are two examples of how a Fundamental matrix can be computed using different.
 * The robust technique attempts to find the best fit Fundamental matrix to the data while removing noisy
 * matches, The simple version just assumes that all the matches are correct. Similar techniques can be used
 * to fit various other types of motion or structural models to observations.
 *
 * The input image and associated features are displayed in a window. In another window, inlier features
 * from robust model fitting are shown.
 *
 * @author Peter Abeles
 */
public class ExampleComputeFundamentalMatrix {
	/**
	 * Given a set of noisy observations, compute the Fundamental matrix while removing the noise.
	 *
	 * @param matches List of associated features between the two images
	 * @param inliers List of feature pairs that were determined to not be noise.
	 * @return The found fundamental matrix.
	 */
	public static DMatrixRMaj robustFundamental( List<AssociatedPair> matches,
												 List<AssociatedPair> inliers, double inlierThreshold ) {
		var configRansac = new ConfigRansac();
		configRansac.inlierThreshold = inlierThreshold;
		configRansac.iterations = 1000;
		ConfigFundamental configFundamental = new ConfigFundamental();
		configFundamental.which = EnumFundamental.LINEAR_7;
		configFundamental.numResolve = 2;
		configFundamental.errorModel = ConfigFundamental.ErrorModel.GEOMETRIC;
		// geometric error is the most accurate error metric, but also the slowest to compute. See how the
		// results change if you switch to sampson and how much faster it is. You also should adjust
		// the inlier threshold.

		ModelMatcher<DMatrixRMaj, AssociatedPair> ransac =
				FactoryMultiViewRobust.fundamentalRansac(configFundamental, configRansac);

		// Estimate the fundamental matrix while removing outliers
		if (!ransac.process(matches))
			throw new IllegalArgumentException("Failed");

		// save the set of features that were used to compute the fundamental matrix
		inliers.addAll(ransac.getMatchSet());

		// Improve the estimate of the fundamental matrix using non-linear optimization
		var F = new DMatrixRMaj(3, 3);
		ModelFitter<DMatrixRMaj, AssociatedPair> refine =
				FactoryMultiView.fundamentalRefine(1e-8, 400, EpipolarError.SAMPSON);
		if (!refine.fitModel(inliers, ransac.getModelParameters(), F))
			throw new IllegalArgumentException("Failed");

		// Return the solution
		return F;
	}

	/**
	 * If the set of associated features are known to be correct, then the fundamental matrix can
	 * be computed directly with a lot less code. The down side is that this technique is very
	 * sensitive to noise.
	 */
	public static DMatrixRMaj simpleFundamental( List<AssociatedPair> matches ) {
		// Use the 8-point algorithm since it will work with an arbitrary number of points
		Estimate1ofEpipolar estimateF = FactoryMultiView.fundamental_1(EnumFundamental.LINEAR_8, 0);

		var F = new DMatrixRMaj(3, 3);
		if (!estimateF.process(matches, F))
			throw new IllegalArgumentException("Failed");

		// while not done here, this initial linear estimate can be refined using non-linear optimization
		// as was done above.
		return F;
	}

	/**
	 * Use the associate point feature example to create a list of {@link AssociatedPair} for use in computing the
	 * fundamental matrix.
	 */
	public static List<AssociatedPair> computeMatches( BufferedImage left, BufferedImage right ) {
		DetectDescribePoint<GrayF32, TupleDesc_F64> detDesc = FactoryDetectDescribe.surfStable(
				new ConfigFastHessian(0, 2, 400, 1, 9, 4, 4), null, null, GrayF32.class);
//		DetectDescribePoint detDesc = FactoryDetectDescribe.sift(null,new ConfigSiftDetector(2,0,200,5),null,null);

		ScoreAssociation<TupleDesc_F64> scorer = FactoryAssociation.scoreEuclidean(TupleDesc_F64.class, true);
		AssociateDescription<TupleDesc_F64> associate = FactoryAssociation.greedy(new ConfigAssociateGreedy(true, 0.1), scorer);

		var findMatches = new ExampleAssociatePoints<>(detDesc, associate, GrayF32.class);

		findMatches.associate(left, right);

		List<AssociatedPair> matches = new ArrayList<>();
		FastAccess<AssociatedIndex> matchIndexes = associate.getMatches();

		for (int i = 0; i < matchIndexes.size; i++) {
			AssociatedIndex a = matchIndexes.get(i);
			var p = new AssociatedPair(findMatches.pointsA.get(a.src), findMatches.pointsB.get(a.dst));
			matches.add(p);
		}

		return matches;
	}

	public static void main( String[] args ) {
		String dir = UtilIO.pathExample("structure/");

		BufferedImage imageA = UtilImageIO.loadImage(dir, "undist_cyto_01.jpg");
		BufferedImage imageB = UtilImageIO.loadImage(dir, "undist_cyto_02.jpg");

		List<AssociatedPair> matches = computeMatches(imageA, imageB);

		// Where the fundamental matrix is stored
		DMatrixRMaj F;
		// List of matches that matched the model
		List<AssociatedPair> inliers = new ArrayList<>();

		// estimate and print the results using a robust and simple estimator
		// The results should be difference since there are many false associations in the simple model
		// Also note that the fundamental matrix is only defined up to a scale factor.
		F = robustFundamental(matches, inliers, 0.5);
		System.out.println("Robust");
		CommonOps_DDRM.divide(F, NormOps_DDRM.normF(F)); // scale to make comparision easier
		F.print();

		F = simpleFundamental(matches);
		System.out.println("Simple");
		CommonOps_DDRM.divide(F, NormOps_DDRM.normF(F));
		F.print();

		// display the inlier matches found using the robust estimator
		var panel = new AssociationPanel(20);
		panel.setAssociation(inliers);
		panel.setImages(imageA, imageB);

		ShowImages.showWindow(panel, "Inlier Pairs");
	}
}